PDB to PDBQT Converter
Paste a PDB structure and convert it into PDBQT for docking pipelines. This browser tool adds element and charge/type columns in PDBQT layout for fast preparation.
PDB Input
PDBQT Output
Ready.
Notes for Docking Workflows
- This tool creates a practical PDBQT text layout directly in-browser for rapid prototyping.
- For production docking runs, you can further refine protonation state and torsion definitions in your docking suite.
- Use this page as a quick conversion utility when you need a fast PDBQT draft structure.